CDS
| Accession Number | TCMCG017C13099 |
| gbkey | CDS |
| Protein Id | OMO96938.1 |
| Location | join(74732..74890,75360..75693,75849..76559,76911..77132,77568..78900,79445..79543,79638..79953) |
| GeneID | InterPro:IPR006849 |
| Organism | Corchorus olitorius |
| locus_tag | COLO4_14974 |
Protein
| Length | 1057aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215141, BioSample:SAMN03160584 |
| db_source | AWUE01015535.1 |
| Definition | IKI3 family protein [Corchorus olitorius] |
| Locus_tag | COLO4_14974 |
EGGNOG-MAPPER Annotation
| COG_category | K |
| Description | Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03016 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11373
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGAAAAACTTGAAGCTTTACTCTGAGATTACTTCGAATCTTCAGTTACAATCAGAAGGCGAAGTATTACTGTTCTCTGCATATGATATTGAGAGAAACCGCTTCTTCTTTGCTTCGTCGGATAATCTCATTTACACTCTCCATCTTTCTTCTTTCCAAAATGAAAGGGCATGGAGCAAAGGTTCACTACAAGCAGAAATTGATACCTTGGATTTGGAGCCTGAAGATGTCATTACTTCCTTTGATTATCTTATGGAGAAAGAAGCACTAATAGTGGGTACCTCTAGTGGCCTCTTACTGCTGCATACAGTGGATGGAAAGGAAACAGAAGTTGTTGGTCGGGTGGAGGGTGGAGTCAAGTGCATCTCCCCAAGTCCCGATGGAGACCTGCTTGGTGTAACCACTGGTTTTGGGCAATTACTGGTCATGACTCATGATTGGGATTTGTTGTATGAGACTGCATTGGAGGACCATCCTGAAGGTATTGACGTACGTGAATTAGATTTTCCGTCACGAGATTTTGGTAGCCCCATTTCTTGGAGAGGAGATGGGAAGTACTTTGCCACTCTAAGCGAGGGGTCAAATTCTTCTGTGAAAAAGAGGCTTAAGGTCTGGGAACGGGATGCTGGAGCATTACATGCTACATCAGAACCAAAGGAATTAATGGGAGCTACTTTGGAATGGATGCCTAGTGGAGCAAAAATTGCAGCTGTTTGTGATAGGAAGGCAGAGAAGGAAGGCCCATCCATAGTTTTCTATGAAAGGAATGGGTTAGAAAGAAGCTCATTTAACATTAATGAACCAATGGATGCAACTGTAGAACTTCTGAAGTGGAATTGCAGTTCTGATCTTCTTGCAGCCATTGTAAGATCTGGAAATTATGATTCTGTTAAGATCTGGTCTTTCAGCAACAATCATTGGTATCTAAAGCATGATATCAAATACTTGAGGAAAGATGGAGTTAGGTTCATGTGGGATCCGACAAAGCCACAGCAGTTAATCTGTTGGACTCTTGGTGGGCAGGTCACAGTTTACAAATTCATCTGGGTTACAGCTGTCATGGAAGACTCAACAGCTTTAGTTATTGATGACTCTAAAATACTTGTGACCCCCCTTTCTTTGTCCTTAATGCCACCTCCTATGCATTTATTCAGCCTTAATTTTCCCAGTCCTGTTCGTGAAATGGCTTTTTATTCTATGAAAGGTCTAGTGCTGGGCATTGTTCCTAATCCAGCTAAAAGATTCTCAGCTTTTGTTCAGTTTGATGGTGGAGAAGTTCTTGAATATTCATCAAAGTTGGGAATTGCCAGAAGGGATTTAAATCATGGTGAGACTAGTTTCTCTTCTTCTTGCCCCTGGATGAACGCGGTTCTGGTAGGTGCCAGTGAACTGTCAAAGCCCTTGCTCTTTGGTCTTGATGACTTGGATTATTCTGGGCTGCAAGTGTTTCTTCAATTGGCTTCTGAGTTTGTCAGACAGGTCAACAATTTGAGTTACATAACTGAGTTTGTCTGTGCCATCAAAAATGAAAATATAACAGAGACACTTTACAAGAAGTTTCTATCTCTGCCTTACTGCAAGGAGCAAAAGGATGTACAACCCAACGACTTCAATGCTAGTTTAGAAACTAACAAAGTGTCATCAGTCCTCCTGGCCATAAGGAGGGCTCTTGAGGAACAAGTATCAGAAAGTCCTGCAAGGGAGCTCTGTATTTTGACCACTTTGGCTCGTAGCTATCCCCCTGCTCTTGAAGAAGCTTTGGAGAGGGTTAAATTTATCCGGGAGATGGAGTTATTAGGTTCTGATGACCCAAGACGAAAGAATCGACCTTCTGCCGAGGAAGCTCTGAAACACCTCTTGTGGTTATCGGATTCAGAGGCTGTGTTTGAAGCTGCTCTGGGCCTTTATGATTTGAACCTTGCAGCTATTGTGGCACTGAACTCCCAGCGAGACCCTAAGGAATTTCTTCCATTTCTCCAAGAATTGGAGCGTATGCCAGCTCTCTTGATGCGCTATAACATTGACCTTAGGCTGCACAGGTTTGAGAAAGCTCTCAAACATATTGTATCAGCAGGTGATACCCATTTTGCTGATTGCATGAACCTTATGAAGAAAAATCCTCAACTTTTTCCTCTAGGACTGCAATTGATAACAGATCCTCCAAAGAGAGGGCAAGTCCTTGAGGCTTGGGGGGATCATCTTAGTGATGAAAAATGCTTTGAAGATGCTGCCGCAACTTACTTGTGTTGCTCCAGTTTGCAGAAGGCTTTGAAGGCATACCGTGAATGTGGTAATTGGAGTGGTGTGCTGACAGTTGCTGGGCTTATAAAGTTGGAAAGAGATGAAGTAATGCAATTGGCTCATGAGCTTTGTGAAGAACTCCAAGCCCTGGGCAAACCAGGAGAAGCTGCGAAAATTGCTTTGGACTACTGTGGAGATGTTAATGCTGGGATTAATTTGCTAATTAGTGCAAGGGAGTGGGAGGAGGCTTTGAGGGTTGCTTTTCTGCATAGAAGAGAGGACTTAGTCTCGGAAGTGAAAAATGCATCATTGGAATGTGCAAGTAGTCTAATTGATGAATATAAGGAAGGGTTGGAGAAAGTGGGAAAATATTTGGCTCGCTATTTAGCTGTTCGACAAAGAAGATTGTTGCTTGCAGCAAAGCTCCGTTCAGAGGAAAGGTCAATAAATGATCTTGATGATGATACTGCTTCTGAAGCTAGTAGTACATTCAGTGGAATGAGCGTCTATACAACAGGGAGTAGAAAGAGCTCTGCTGCTTCCACTGGATCAACTGTGGCTAGTAGGGCTAGAGATGCAAGACGTCAGCGAAGCAGAGGAAAAATTCGCCCTGGCAGTCCTGGTGAGGAGATGGCTCTTGTAGAACATTTGAAAGGCATGTCTCTAACAGCTGGAGCAAAGCATGAACTTAGGTCCTTGTTGATTTCACTTGTAATGCTTGGCAAGGAAGAAACTGCACGGAAGTTGCAACAGGTGGCAGAGAACTTTCAACTATCTCACATCGCAGCAGTCAGACTAGCTGAAGATACAGTGTCTAGTGATAGCATAAATGAACATGCACATACTTTGGAGCGTTATTTACAGAAAGTGAAAACTGAAGTGCCAGATGCAGATGCTTTTTCATGGCGCTGTAGAGTATTCCTTTCTCCTTAG |
| Protein: MKNLKLYSEITSNLQLQSEGEVLLFSAYDIERNRFFFASSDNLIYTLHLSSFQNERAWSKGSLQAEIDTLDLEPEDVITSFDYLMEKEALIVGTSSGLLLLHTVDGKETEVVGRVEGGVKCISPSPDGDLLGVTTGFGQLLVMTHDWDLLYETALEDHPEGIDVRELDFPSRDFGSPISWRGDGKYFATLSEGSNSSVKKRLKVWERDAGALHATSEPKELMGATLEWMPSGAKIAAVCDRKAEKEGPSIVFYERNGLERSSFNINEPMDATVELLKWNCSSDLLAAIVRSGNYDSVKIWSFSNNHWYLKHDIKYLRKDGVRFMWDPTKPQQLICWTLGGQVTVYKFIWVTAVMEDSTALVIDDSKILVTPLSLSLMPPPMHLFSLNFPSPVREMAFYSMKGLVLGIVPNPAKRFSAFVQFDGGEVLEYSSKLGIARRDLNHGETSFSSSCPWMNAVLVGASELSKPLLFGLDDLDYSGLQVFLQLASEFVRQVNNLSYITEFVCAIKNENITETLYKKFLSLPYCKEQKDVQPNDFNASLETNKVSSVLLAIRRALEEQVSESPARELCILTTLARSYPPALEEALERVKFIREMELLGSDDPRRKNRPSAEEALKHLLWLSDSEAVFEAALGLYDLNLAAIVALNSQRDPKEFLPFLQELERMPALLMRYNIDLRLHRFEKALKHIVSAGDTHFADCMNLMKKNPQLFPLGLQLITDPPKRGQVLEAWGDHLSDEKCFEDAAATYLCCSSLQKALKAYRECGNWSGVLTVAGLIKLERDEVMQLAHELCEELQALGKPGEAAKIALDYCGDVNAGINLLISAREWEEALRVAFLHRREDLVSEVKNASLECASSLIDEYKEGLEKVGKYLARYLAVRQRRLLLAAKLRSEERSINDLDDDTASEASSTFSGMSVYTTGSRKSSAASTGSTVASRARDARRQRSRGKIRPGSPGEEMALVEHLKGMSLTAGAKHELRSLLISLVMLGKEETARKLQQVAENFQLSHIAAVRLAEDTVSSDSINEHAHTLERYLQKVKTEVPDADAFSWRCRVFLSP |